GitHub

Seq2Pocket: From Sequence-Level pLM Predictions to 3D Structural Pockets

Seq2Pocket is a framework for protein ligand binding site (LBS) prediction that maps sequence-level predictions to 3D structural pockets. The method utilizes finetuned protein language model (pLM) to ...
GitHub

README.md

Yes, but be CAREFUL, the bfactor column is populated with pLDDT confidence values (higher = better). Phenix.phaser expects a "real" bfactor, where (lower = better). See post from Claudia Millán. What ...
C&EN

Characterization of a Conformation-Restricted Amyloid β Peptide and Immunoreactivity of Its Antibody in Human AD brain

Division of Food Science & Biotechnology, Graduate School of Agriculture, Kyoto University, Kyoto 606-8502, Japan ...
C&EN

High-Resolution Hydrogen–Deuterium Protection Factors from Sparse Mass Spectrometry Data Validated by Nuclear Magnetic Resonance Measurements

School of Molecular and Cellular Biology, University of Leeds, LS2 9JT Leeds, United Kingdom ...