A framework for analyzing single-cell genomics data, in which geometrical properties are harnessed to obtain insights on cellular diversity, including precise clustering, clear visualizations, and ...

STM-Graph is a Python framework for analyzing spatial-temporal urban data and doing predictions using Graph Neural Networks. It provides a complete end-to-end pipeline from raw event data to trained ...

Here we introduce methylR, a complete pipeline for the analysis of both 450K and EPIC Illumina arrays which not only offers data visualization and normalization but also provide additional features ...